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1、Chapter1Genomestructure1.Fromyourunderstwhatarethemainchallengesingenomicsthatwewillconfrontwithinthefuture(1)Toexplainthemechanismofevolutionvariationamongdifferentspecies.(2)Tocloneacterizethekeyfunctionalgenesincrop.(
2、3)Usinggenomicstoolstoincreasethecropyieldresolvethefoodcrisisinthewld.(4)Toacterizethestructuresfunctionsofhumangenome.(5)Betterunderstingtheknowledgeofheritablegeicvariationsinhumangenome.(6)Applynewknowledgeofgenemeta
3、bolicpathwaytodevelopneweffectivemethodsfhumandiseasetreatment.2.WhataretheadvantagesofDNAasthegeicmaterial?(1)DNAcontainsalargeamountofinfmationhighintegration.(2)Complementarybasepairsensureaccuratereplication.(3)Highs
4、tabilityinwater.3.HowdoseDNAfunctionadvantageoverRNA(1)BothDNARNAcanserveasgeicmaterialmanyvirusesuseRNAastheirgeicmaterial.DNAprobablyevolvedasthegeicmaterialfcellssothatRNAcouldbeusedasmessengerRNAwhichcarriestheinfmat
5、ionfproteinsynthesistotheribosomes.ThemRNAismetabolicallyunstablebecauseitisrapidlybrokendownbyRNAse.DNAmustbestablesoRNAhadtoevolvetofulfillthisfunction.(2)BothDNARNAhavethesamecodingcapacity.Theybotharepolymerswithsimi
6、larpotentiallength.DNAthatcommonlyexistsinalllivingganismsbutisnotreallycommonwithRNA.SomevirusesareexceptionalbecausetheyexistwithasinglestrofDNAwithadoublestrofRNA.(3)ThemostimptantbyfaristhatDNAistypicallydoublestred.
7、Thishasanumberofadvantagesthemostimmediatebeingwhenonestrbreakstheentiremoleculedoesnotfallapart.(4)Ifanerrismadeinonestrononebasetheotherstrisstillthereinitsiginaldertohelpmaintaintheiginalsequenceontheoppositestrwhenac
8、rectionenzymecomesalongtoclipoutthemismatch.4.ShtdeionsthetwoimptantexperimentswhichprovedthatgenesaremadeofDNA(1)Thetransfmingprinciple:Whenharmlessbacteriaharmlessbacteriatransfmingprincipletreatedwithdeoxyribonuclease
9、injecttolivemousethemousecansurviveHoweverwhenthelivemousewasinjectedwithharmlessbacteriatransfmingprincipleharmlessbacteriatransfmingprincipletreatedwithproteaseribonucleasethemousewilldie.(2)TheHersheyChaseexperiment:W
10、ith32PtagfirstphageDNAwith35Smarkerproteinofphagethephageadsptionone.coliPutincentrifugetubethenagitateinblenderphageattachedtobacteriaAfterthisputitintocentrifugesomeminutesphagenowdetachedSupernatantwascapsidproteinpel
11、letofbacteriaincluding70%32P20%35S.Chapter2DNAReplication5.PleaselistthenamesofthreemainthetypesofDNAmutation.(1)Spontaneousmutations(2)Mutationscausedbyphysicalmutagens11.Whatarethethreekeystagesoftranion(1)Initiation:d
12、escribesthesynthesisofthefirstnucleotidebondsinRNA.(2)Elongation:theenzymemovesalongtheDNAextendsthegrowingRNAchain.(3)Termination:involvesrecognitionofthepointatwhichnofurtherbasesshouldbeaddedtothechain.12.Whatisthegei
13、ccodewhatarethestopcodonsstartcode(1)Thegeiccodeisthesetofrulesbywhichinfmationencodedingeicmaterialistranslatedintoproteinsbylivingcells.Geiccodeconsistsofatripletcodethatisasequenceofthreebasescodesfaparticularaminoaci
14、d.(2)ThestartcodonsareachaininitiationcodonthattranslationstartswiththemostcommonstartcodonisAUGalternativestartcodonsinclude“GUG““UUG”.(3)Thethreestopcodonshavebeengivennames:UAGUGAUAA.Stopcodonsarealsocalled“terminatio
15、n““nonsense“codons.Chapter4GenomeCloning13.Howmanytypesofenzymesinvolvedingenecloning(1)DNAligases:whichjoinDNAmoleculestogetherbysynthesizingphosphodiesterbondsbetweennucleotidesattheendsoftwodifferentmoleculesatthetwoe
16、ndsofasinglemolecule.(2)DNApolymerases:whichareenzymesthatsynthesizenewpolynucleotidescomplementarytoanexistingDNARNAtemplate.(3)Alkalinephosphatase:whichremovesthephosphategrouppresentatthe5terminusofaDNAmolecule.(4)Oth
17、erenzymes:TaqDNApolymerases、nucleases、endmodificationenzymesetc.14.WhatisrestrictionenzymehowmanytypesdoesithaveRestrictionenzymeisanenzymethatbindstoaDNAmoleculeataspecificsequencemakesadoublestredcutatnearthatsequenceT
18、ypesⅠ:lessusefulbecausetheycutDNAromlysequencesoftheresultingfragmentsarenotpreciselyknown(EcoB、EcoK)。TypesⅡ:over2300typeⅡenzymescuttingDNAisalwaysatthesameplaceeitherwithintherecognitionsequenceveryclosetoithavepalindro
19、micstructure.TypesⅢ:recognizetwoseparatenonpalindromicsequencesthatareinverselyiented(e.g.EcoP15).TheydonotcutDNAatthesamepoints.15.Whataretheidealrequirementsfaplas(1)smallsizehighcopynumbereasyfmanipulation.(2)canrepli
20、cateindependentlyinthehostcellchromosome.(3)onemesinglerestrictionenzymecuttingsites.(4)severalablemarkergenes.16.PleaseoutlinethefourregulatypatternsfmingbytheinteractionoftranionalregulatyproteinsmalleffectfactsPositiv
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